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Web App Design for Surface Plasmon Resonance Signal Processing
Anshori I.a, Baleno Rama M.a, Ezra R.a, Harimurti S.a, Gumilar G.a, Yusuf M.b, Prastriyati Sari S.b, Yuliarto B.a, Arnafia W.c
a Institut Teknologi Bandung, Lab-on-a-Chip Laboratory, Department of Biomedical Engineering, Bandung, Indonesia
b Universitas Padjadjaran, Research Center for Molecular Biotechnology and Bioinformatics, Bandung, Indonesia
c PT. Tekad Mandiri Citra, Bandung, Indonesia
[vc_row][vc_column][vc_row_inner][vc_column_inner][vc_separator css=”.vc_custom_1624529070653{padding-top: 30px !important;padding-bottom: 30px !important;}”][/vc_column_inner][/vc_row_inner][vc_row_inner layout=”boxed”][vc_column_inner width=”3/4″ css=”.vc_custom_1624695412187{border-right-width: 1px !important;border-right-color: #dddddd !important;border-right-style: solid !important;border-radius: 1px !important;}”][vc_empty_space][megatron_heading title=”Abstract” size=”size-sm” text_align=”text-left”][vc_column_text]© 2020 IEEE.The rapid spread of COVID-19 disturbs the availability of the diagnostic tests for detecting COVID-19. Recently, a new test method is being developed by the cooperation between BPPT, ITB, Unpad and PT. TMC. The method is called as the Surface Plasmon Resonance (SPR). However, the data output of the SPR device must be further processed to obtain a powerful information. Hence, we propose a new approach for interactively visualizing SPR data by designing a web app platform. By this platform, user/operator can directly upload the SPR data output file in the web app. In the current design, the imported data are stored in the cloud storage. Moreover, user can also enter additional data for the purpose of labelling the graph that will be automatically generated. Bokeh was chosen as a Python library for visualizing data into an interactive graph. The graph features are label, tooltips, and interactive legend. A SPR data can have various signal responses. But, the labels can be as the help to distinguish those responses. The tooltips allow the user to obtain detailed information from a data point. Meanwhile, the interactive legend is used to distinguish SPR data plot and baseline plot. Therefore, by the use of this web app, the SPR sample analysis could be done just within in minutes. It also only requires a web browser and Python to works.[/vc_column_text][vc_empty_space][vc_separator css=”.vc_custom_1624528584150{padding-top: 25px !important;padding-bottom: 25px !important;}”][vc_empty_space][megatron_heading title=”Author keywords” size=”size-sm” text_align=”text-left”][vc_column_text]Additional datum,Automatically generated,Cloud storages,Diagnostic tests,New approaches,Sample analysis,Signal response,Surface plasmon resonance signals[/vc_column_text][vc_empty_space][vc_separator css=”.vc_custom_1624528584150{padding-top: 25px !important;padding-bottom: 25px !important;}”][vc_empty_space][megatron_heading title=”Indexed keywords” size=”size-sm” text_align=”text-left”][vc_column_text]Bokeh,Python,Surface Plasmon Resonance,Web app[/vc_column_text][vc_empty_space][vc_separator css=”.vc_custom_1624528584150{padding-top: 25px !important;padding-bottom: 25px !important;}”][vc_empty_space][megatron_heading title=”Funding details” size=”size-sm” text_align=”text-left”][vc_column_text]ACKNOWLEDGMENT The authors would like to thank to Badan Pengkajian dan Penerapan Teknologi (BPPT) for the funding support and the research project management of the National Task Force of the Republic of Indonesia for Covid-19 (TFRIC-19) Non-PCR test Subgroup as well as PT Tekad Mandiri Citra (TMC) for the generous support in providing the NanoSPR8 equipment for this research work. Additionally, the authors would also like to thank to Pusat Riset Bioteknologi Molekuler dan Bioinformatika Universitas Padjadjaran for providing the facilities required to conduct the whole research experiments.[/vc_column_text][vc_empty_space][vc_separator css=”.vc_custom_1624528584150{padding-top: 25px !important;padding-bottom: 25px !important;}”][vc_empty_space][megatron_heading title=”DOI” size=”size-sm” text_align=”text-left”][vc_column_text]https://doi.org/10.1109/ICRAMET51080.2020.9298653[/vc_column_text][/vc_column_inner][vc_column_inner width=”1/4″][vc_column_text]Widget Plumx[/vc_column_text][/vc_column_inner][/vc_row_inner][/vc_column][/vc_row][vc_row][vc_column][vc_separator css=”.vc_custom_1624528584150{padding-top: 25px !important;padding-bottom: 25px !important;}”][/vc_column][/vc_row]